| “And the Children Shall Lead”: Gorgon Summoned (M54–60) / Gorgon Zapped (M61) | George Duning / George Duning, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry | | | 5:13 | |
| “And the Children Shall Lead”: Main Title (soprano version, third season mix) (2006 recording) | George W. Duning, arranged by Alexander Courage, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry | | | 1:08 | |
| “And the Children Shall Lead”: Mislead Innocent (M38) / McCoy Mad (M41) / Out of Orbit (M42) / Call the Angel (M43/M43A) | George Duning / George Duning, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry / George Duning, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry / George Duning | | | 2:58 | |
| “And the Children Shall Lead”: Out of Orbit (alternate) (M42A) | George Duning, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry | | | 0:17 | |
| “And the Children Shall Lead”: Standard Orbit #1 (M31) / Starnes’ Tape (M32) / Kids’ Whammy #2 (M33) / Tommy’s Whammy (M34) / Standard Orbit #2 (M35) / Whammed Crew (M36/M36A) / Starnes’ Story (M37) | George Duning, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry / George Duning / George Duning / George Duning / George Duning, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry / George Duning, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry / George Duning | | | 5:38 | |
| “And the Children Shall Lead”: Starship Again (M21) / Instant Ice Cream (M22) | George Duning, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry / George Duning | | | 1:06 | |
| “And the Children Shall Lead”: Triacus (M11) / What Goes Kids? (M12) | George Duning, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry / George Duning | | | 2:43 | |
| “Balance of Terror”: Theme from Star Trek (9MA part 4) / Romulan Warship (M31) / Romulan Theme (M22A take 3) | Alexander Courage & Gene Roddenberry / Fred Steiner / Fred Steiner | | | 0:57 | |
| “Charlie X”: Main Title (cello version) | Alexander Courage & Gene Roddenberry, arranged by Fred Steiner | | | 0:55 | |
| “Is There in Truth No Beauty?”: Ambassador Arrival (alternate) (M13A) | George Duning, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry | | | 0:18 | |
| “Is There in Truth No Beauty?”: Ambassador Arrival (M13) / My Life Is Here (M14) / I Must Know (M15) / Starship Party (M21) | George Duning, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Alexander Courage / George Duning, contains "Mr. Spock" by Gerald Fried / George Duning / George Duning, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry | | | 3:38 | |
| “Is There in Truth No Beauty?”: Don’t Move (M61) / Spock Out (M62) / No Change (M63) / Miranda Mad (M64/M64B/M64A/M64C) / Miranda’s Farewell (M65) | George Duning / George Duning / George Duning / George Duning, contains "Mr. Spock" by Gerald Fried / George Duning, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry and "Mr. Spock" by Gerald Fried | | | 7:25 | |
| “Is There in Truth No Beauty?”: Enter Marvick (M11) / Enter Miranda (M12) | George Duning, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry / George Duning, contains "Mr. Spock" by Gerald Fried | | | 1:39 | |
| “Is There in Truth No Beauty?”: Hero Spock (M53/M53A/M53) | George Duning, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry and "Mr. Spock" by Gerald Fried | | | 3:41 | |
| “Spectre of the Gun”: Final Curtain (alternate) (M63C) | Jerry Fielding, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry | | | 0:15 | |
| “The Cage”: Main Title (M10) | Alexander Courage & Gene Roddenberry | | | 1:01 | |
| “The Cage”: Who Was Eve & End Credits (M82) | Alexander Courage & Gene Roddenberry | | | 1:39 | |
| “The Conscience of the King”: Everything Is Later (M51) / Play-Off #3 (M52) | Joseph Mullendore, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry | | | 1:54 | |
| “The Conscience of the King”: Kirk and Lenore (M22) / He’s Dead (M23) | Joseph Mullendore, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry / Joseph Mullendore | | | 1:45 | |
| “The Conscience of the King”: Opheliamania (M62) / Bridge #2 (M63) / Last Cue (M64) | Joseph Mullendore, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry | | | 3:08 | |
| “The Conscience of the King”: Play-On #2 (M42) / Quick Ship (M43) / Phaser Overload (M44) | Joseph Mullendore, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry / Joseph Mullendore, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry / Joseph Mullendore | | | 1:41 | |
| “The Conscience of the King”: Ship Play-On (M53) / Woodwind Fanfare (M54) / Reilly Gone (M55) | Sol Kaplan, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry / Joseph Mullendore / Joseph Mullendore | | | 1:12 | |
| “The Conscience of the King”: Spaceship (M24) / 5 Sex and a 1 (M25) / 2 Play-Off #2 (M26) | Joseph Mullendore, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry / Joseph Mullendore / Joseph Mullendore, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry | | | 1:12 | |
| “The Conscience of the King”: Spaceship Play-On (M27) / Toast and Corridor (M31) / Lenore’s Kiss (M32) / Short Bridge (M33) | Sol Kaplan, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry / Sol Kaplan, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry / Joseph Mullendore / Joseph Mullendore | | | 2:33 | |
| “The Conscience of the King”: Spaceship Titles (M13) / Dr. Leighton’s Face (M14) / Bridge #1 (M15) | Joseph Mullendore, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry / Joseph Mullendore / Joseph Mullendore, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry | | | 1:14 | |
| “The Empath”: Empath Finale (M64) | George Duning, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry and "Mr. Spock" by Gerald Fried | | | 1:12 | |
| “The Empath”: How’s It Going (M41) / Spock’s Hypo (M42) / Spock Stuck (M43) / McCoy Tortured (M44) / Gem Wistful (M45) | George Duning, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry / George Duning / George Duning, contains "Mr. Spock" by Gerald Fried / George Duning / George Duning | | | 3:55 | |
| “The Empath”: Starship Again (M11) / Nova Phase (M12) / What Happened? (M13) | George Duning, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry / George Duning / George Duning | | | 2:03 | |
| “The Empath”: Vians’ Farewell (M62/M62A) / Off Again (M63) | George Duning / George Duning, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry | | | 1:53 | |
| “The Enemy Within”: Alter Ego (M14) | Sol Kaplan, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry | | | 1:02 | |
| “The Enemy Within”: Another Brandy (M45) / The Evil Grin (M46) / Double Dog Death (M51) | Sol Kaplan / Sol Kaplan / Sol Kaplan, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry | | | 1:27 | |
| “The Enemy Within”: Kirk’s Log (M24) / Indecisive (M31) / Evil Fury (M32) | Sol Kaplan , contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry / Sol Kaplan / Sol Kaplan | | | 2:50 | |
| “The Enemy Within”: One Captain Kirk (M63) / Thank You, Yeoman (M64) | Sol Kaplan, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry | | | 1:25 | |
| “The Enemy Within”: Spock Takes Over (M52) / Help Me (M53) | Sol Kaplan, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry | | | 2:06 | |
| “The Enemy Within”: The Prone Body (M34–41) / Shivering Sulu (M42) / No Repair ( M43) | Sol Kaplan, contains "Theme From Star Trek (TV Series)" by Alexander Courage, Gene Roddenberry / Sol Kaplan, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry / Sol Kaplan | | | 0:39 | |
| “The Enemy Within”: The Rock Slide (M11) / Beam Up (M12) / The Evil Kirk (M13) | Sol Kaplan, contains "Theme From Star Trek (TV Series)" by Alexander Courage, Gene Roddenberry / Sol Kaplan, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry / Sol Kaplan | | | 1:13 | |
| “The Enemy Within”: The Tired Captain (M15) | Sol Kaplan, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry | | | 0:44 | |
| “The Enemy Within”: Two Into One (M62) | Sol Kaplan, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry | | | 2:21 | |
| “The Enemy Within”: What to Do (M44) | Sol Kaplan, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry | | | 0:45 | |
| “The Man Trap”: Main Title (electric violin version) | Alexander Courage & Gene Roddenberry | | | 0:55 | |
| “The Man Trap”: Warp One (M62) | Alexander Courage & Gene Roddenberry | | | 0:48 | |
| “The Naked Time”: Brass Monkeys (M10) / Out of Glove (M11) | Alexander Courage & Gene Roddenberry / Alexander Courage | | | 3:00 | |
| “The Naked Time”: Breaking Planet (M12) / Sweaty Palm (M13) / Itchy Hand (M14) | Alexander Courage & Gene Roddenberry / Alexander Courage / Alexander Courage | | | 1:23 | |
| “The Naked Time”: End Title (electric violin version) | Alexander Courage & Gene Roddenberry | | | 0:46 | |
| “The Naked Time”: Pulled Down (M22) / It Spreads (M23) | Alexander Courage & Gene Roddenberry / Alexander Courage | | | 1:15 | |
| “What Are Little Girls Made Of?”: End Title (cello version) | Alexander Courage & Gene Roddenberry, arranged by Fred Steiner | | | 0:45 | |
| A Letter from a Network Censor | Gene Roddenberry | | | 5:03 | |
| About Science Fiction | Gene Roddenberry | | | 0:40 | |
| Asimov’s World of Science Fiction | Gene Roddenberry | | | 6:28 | |
| Cyborg Tools and E.T. Life Forms | Gene Roddenberry | | | 4:06 | |
| End Title (Soprano Version, Stereo; Cond. Hatch) | Alexander Courage & Gene Roddenberry | | | 0:44 | |
| Inside Star Trek | Gene Roddenberry | | | 1:04 | |
| Introduction to Live Show | Gene Roddenberry | | | 0:25 | |
| Introduction: Nichelle Nichols | Gene Roddenberry | | | 1:12 | |
| Main Title (Season One) | Alexander Courage And Gene Roddenberry | | | 0:51 | |
| Main Title (Season Three) | Alexander Courage And Gene Roddenberry | | | 1:01 | |
| McCoy’s Rx for Life | Gene Roddenberry | | | 6:14 | |
| Quasi-Sex | Alexander Courage & Gene Roddenberry, arranged by Joseph Mullendore | | | 1:40 | |
| Sarek’s Son Spock | Gene Roddenberry | | | 7:21 | |
| Seite A | D.C. Fontana, Gene Roddenberry | | | 17:39 | |
| Seite A | D.C. Fontana, Gene Roddenberry | | | 17:54 | |
| Seite A | D.C. Fontana, Gene Roddenberry | | | 17:16 | |
| Seite B | D.C. Fontana, Gene Roddenberry | | | 17:39 | |
| Seite B | D.C. Fontana, Gene Roddenberry | | | 17:54 | |
| Seite B | D.C. Fontana, Gene Roddenberry | | | 17:16 | |
| Sign Off: Nichelle Nichols | Gene Roddenberry | | | 0:46 | |
| Star Trek Philosophy | Gene Roddenberry | | | 4:40 | |
| Star Trek Theme | Gene Roddenberry | | | 3:28 | |
| Star Trek: The Experience - Klingon Encounter | Jay Chattaway and Alexander Courage and Gene Roddenberry | | | 4:26 | |
| Star Trek: The Next Generation - Unification I & II #208-207 - Theme From Star Trek (TV Series) ("Gene Roddenberry 1921-1991") | Alexander Courage and Gene Roddenberry | | | 0:12 | |
| The Enterprise Runs Around | Gene Roddenberry | | | 1:49 | |
| The Genesis II Pilot | Gene Roddenberry | | | 2:34 | |
| The Origin of Spock | Gene Roddenberry | | | 1:45 | |
| The Questor Affair | Gene Roddenberry | | | 3:49 | |
| The Star Trek Dream (Ballad 1 / Ballad 2) | Gene Roddenberry | | | 5:48 | |
| Theme From "Star Trek" | Gene Roddenberry & Alexander Courage | | | ?:?? | |
| Theme From Star Trek | Gene Roddenberry | | | 1:33 | |
| Theme from Star Trek (TV Series) (Polka version) | Alexander Courage and Gene Roddenberry | | | 0:55 | |
| Theme from Star Trek (TV Series) (Torch Song version) | Alexander Courage and Gene Roddenberry | | | 1:34 | |
| Third Season Library Music: More Soup (from “Amok Time” M26-30B) (LM126) | Gerald Fried, contains "Theme From Star Trek (TV Series)" by Alexander Courage & Gene Roddenberry | | | 2:02 | |
| Time Reverse / Future Risk and End Title | Alexander Courage & Gene Roddenberry | | | 1:50 | |
| William Shatner Meets Captain Kirk | Gene Roddenberry | | | 9:12 | |
